SERF


De Novo Sequence Analysis of Genomic Data from Next Generation Sequencers to identify biomarkers.

Web enabled Cloud scale Analytics.

v86

SERF MASK


De novo Identification and Masking of Repeats in Genomic Data from Next Generation Sequencers.

Web enabled Cloud scale Analytics.

v86

SERF DB


Database of results from SERF de-novo sequence analysis of Plant, Animal an Human Genomes.

Web enabled Cloud scale Analytics.

v86

SERF CHART


Graphical data visualization of SERF analysis results

Web enabled Cloud scale Analytics.

v86

SERF UTILS


Cluster results of SERF analysis by size, position, motif and totals

Web enabled Cloud scale Analytics.

v86

STAR


Alignment of large sets of high-throughput sequencing reads to a reference genome.

Web enabled Cloud scale Analytics.

v2.6.1c

BWA


Alignment of Short Reads from Next Generation Sequencers to Reference Genome.

Web enabled Cloud scale Analytics.

v0.7.17

BOWTIE


Alignment of Short Reads from Next Generation Sequencers to Reference Genome.

Web enabled Cloud scale Analytics.

v1.2.2

BOWTIE2


Alignment of Reads from Next Generation Sequencers to Reference Genome.

Web enabled Cloud scale Analytics.

v2.3.4

SAMTOOLS


Manipulation of read alignments including sorting, merging, indexing, retrieval of reads and Mpileups.

Web enabled Cloud scale Analytics.

v1.9

BCFTOOLS


Analytics and utilities for CNVs, Consensus, Annotations and other Variant Calling using VCF or BCF data.

Web enabled Cloud scale Analytics.

v1.9

VCFTOOLS


Analytics and utilities for Variant Calling using VCF data.

Web enabled Cloud scale Analytics.

v0.1.15

CUTADAPT


Remove adapter sequences from high-throughput sequencing reads

Web enabled Cloud scale Analytics.

v1.16

CUFFLINKS


Transcript assembly, differential expression, and differential regulation for RNA-Seq

Web enabled Cloud scale Analytics.

v2.2.1

WGSIM


Generation of sequenced reads from a reference genome with SNPs and INDEL polymorphisms.

Web enabled Cloud scale Analytics.

v1.9

BioSerf Analytics Workflow

Analytics Workflow

BioSerf Variant Calling Workflow

Workflow

BioSerf RNA Sequence Analysis STAR Workflow

Workflow

BioSerf RNA Sequence Analysis TopHat Workflow

Workflow

BioSerf Telomere Analytics Workflow

Workflow

De novo Sequence Analysis

Workflow

Web enabled Bioinformatics

No software to install. No operating system commands to learn. Focus on Biology.

Web User Interface

Cloud Computing Resources

Scalable Server and Storage for Analytics

1CPU 2GB

Unlimited Storage
  • 1 CPU Cores
  • 2GB RAM Memory
  • Unlimited Storage
  • Secure Access
  • Dedicated Resource
  • Small Scale Analytics

2CPU 8GB

Unlimited Storage
  • 2 CPU Cores
  • 8GB RAM Memory
  • Unlimited Storage
  • Secure Access
  • Dedicated Resource
  • Small Scale Analytics

4CPU 16GB

Unlimited Storage
  • 4 CPU Cores
  • 16GB RAM Memory
  • Unlimited Storage
  • Secure Access
  • Dedicated Resource
  • Medium Scale Analytics

8CPU 32GB

Unlimited Storage
  • 8 CPU Cores
  • 32GB RAM Memory
  • Unlimited Storage
  • Secure Access
  • Dedicated Resource
  • Large Scale Analytics

16CPU 64GB

Unlimited Storage
  • 16 CPU Cores
  • 64GB RAM Memory
  • Unlimited Storage
  • Secure Access
  • Dedicated Resource
  • Very Large Scale Analytics

32CPU 128GB

Unlimited Storage
  • 32CPU Cores
  • 128GB RAM Memory
  • Unlimited Storage
  • Secure Access
  • Dedicated Resource
  • Very Large Scale Analytics

48CPU 192GB

Unlimited Storage
  • 48CPU Cores
  • 192GB RAM Memory
  • Unlimited Storage
  • Secure Access
  • Dedicated Resource
  • Very Large Scale Analytics

64CPU 256GB

Unlimited Storage
  • 64CPU Cores
  • 256GB RAM Memory
  • Unlimited Storage
  • Secure Access
  • Dedicated Resource
  • Very Large Scale Analytics

72CPU 192GB

Unlimited Storage
  • 72CPU Cores
  • 192GB RAM Memory
  • Unlimited Storage
  • Secure Access
  • Dedicated Resource
  • Very Large Scale Analytics

96CPU 384GB

Unlimited Storage
  • 96 CPU Cores
  • 384GB RAM Memory
  • Unlimited Storage
  • Secure Access
  • Dedicated Resource
  • Very Large Scale Analytics

128CPU 2000GB

Unlimited Storage
  • 128 CPU Cores
  • 2000GB RAM Memory
  • Unlimited Storage
  • Secure Access
  • Dedicated Resource
  • Very Large Scale Analytics

Unlimited CPU

Unlimited Storage
  • Unlimited CPU Cores
  • Unlimited RAM Memory
  • Unlimited Storage
  • Secure Access
  • Dedicated Resource
  • Very Large Scale Analytics

Deployment Models

External Cloud

Cloud Server

Run analytics securely on scalable cloud server and storage infrastructure. No hardware or software to install. Access analysis tool suite on laptops, desktops or mobile phones. Web User Interface without need for Linux System or Command Line Interface knowhow enables focus on biology.

Deploy
Inhouse Cloud Server

Inhouse Server

Run analytics on your private inhouse servers. Access analysis tool suite on laptops, desktops or mobile phones. Web User Interface without need for Linux System or Command Line Interface knowhow enables focus on biology.

Deploy
Personal loud

Personal Server

Run analytics on personal Linux or Mac computer. Web User Interface without need for Linux System or Command Line Interface knowhow enables focus on biology.

Deploy

 

 

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